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  5. AT5G39590

AT5G39590


Description : TLD-domain containing nucleolar protein


Gene families : OG_01_0006965 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39590
Cluster HCCA: Cluster_205


Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003878 ATP citrate synthase activity IEP HCCA
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004108 citrate (Si)-synthase activity IEP HCCA
MF GO:0004557 alpha-galactosidase activity IEP HCCA
MF GO:0004587 ornithine-oxo-acid transaminase activity IEP HCCA
MF GO:0004607 phosphatidylcholine-sterol O-acyltransferase activity IEP HCCA
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005779 integral component of peroxisomal membrane IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006085 acetyl-CoA biosynthetic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006527 arginine catabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006560 proline metabolic process IEP HCCA
BP GO:0006561 proline biosynthetic process IEP HCCA
BP GO:0006591 ornithine metabolic process IEP HCCA
BP GO:0006593 ornithine catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006677 glycosylceramide metabolic process IEP HCCA
BP GO:0006687 glycosphingolipid metabolic process IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
CC GO:0009346 ATP-independent citrate lyase complex IEP HCCA
BP GO:0009395 phospholipid catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009720 detection of hormone stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009726 detection of endogenous stimulus IEP HCCA
BP GO:0009727 detection of ethylene stimulus IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0009970 cellular response to sulfate starvation IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010189 vitamin E biosynthetic process IEP HCCA
BP GO:0010260 animal organ senescence IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0010293 abscisic aldehyde oxidase activity IEP HCCA
BP GO:0010350 cellular response to magnesium starvation IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010726 positive regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010728 regulation of hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0010729 positive regulation of hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016137 glycoside metabolic process IEP HCCA
BP GO:0016139 glycoside catabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017050 D-erythro-sphingosine kinase activity IEP HCCA
BP GO:0018008 N-terminal peptidyl-glycine N-myristoylation IEP HCCA
BP GO:0018201 peptidyl-glycine modification IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
BP GO:0019377 glycolipid catabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019544 arginine catabolic process to glutamate IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030149 sphingolipid catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031111 negative regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031113 regulation of microtubule polymerization IEP HCCA
BP GO:0031114 regulation of microtubule depolymerization IEP HCCA
BP GO:0031115 negative regulation of microtubule polymerization IEP HCCA
BP GO:0031117 positive regulation of microtubule depolymerization IEP HCCA
CC GO:0031231 intrinsic component of peroxisomal membrane IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0032026 response to magnesium ion IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034486 vacuolar transmembrane transport IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
MF GO:0035671 enone reductase activity IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0035865 cellular response to potassium ion IEP HCCA
MF GO:0036440 citrate synthase activity IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042360 vitamin E metabolic process IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043325 phosphatidylinositol-3,4-bisphosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0044766 multi-organism transport IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
BP GO:0046477 glycosylceramide catabolic process IEP HCCA
BP GO:0046479 glycosphingolipid catabolic process IEP HCCA
BP GO:0046514 ceramide catabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP HCCA
CC GO:0048471 perinuclear region of cytoplasm IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
MF GO:0050302 indole-3-acetaldehyde oxidase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0051511 negative regulation of unidimensional cell growth IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0070370 cellular heat acclimation IEP HCCA
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP HCCA
MF GO:0070547 L-tyrosine aminotransferase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071280 cellular response to copper ion IEP HCCA
BP GO:0071286 cellular response to magnesium ion IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071325 cellular response to mannitol stimulus IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0072708 response to sorbitol IEP HCCA
BP GO:0072709 cellular response to sorbitol IEP HCCA
BP GO:0075733 intracellular transport of virus IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
MF GO:0080124 pheophytinase activity IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0090414 molybdate ion export from vacuole IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901881 positive regulation of protein depolymerization IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1902579 multi-organism localization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903426 regulation of reactive oxygen species biosynthetic process IEP HCCA
BP GO:1903428 positive regulation of reactive oxygen species biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:2000379 positive regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006571 TLDc_dom 319 486
PLAZA 3.0 Dicots AT5G39590