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  5. AT5G40250

AT5G40250


Description : RING/U-box superfamily protein


Gene families : OG_01_0003401 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G40250
Cluster HCCA: Cluster_22


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005798 Golgi-associated vesicle IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006566 threonine metabolic process IEP HCCA
BP GO:0006567 threonine catabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009068 aspartate family amino acid catabolic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009798 axis specification IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
CC GO:0030136 clathrin-coated vesicle IEP HCCA
CC GO:0030140 trans-Golgi network transport vesicle IEP HCCA
MF GO:0030371 translation repressor activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050792 regulation of viral process IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1900150 regulation of defense response to fungus IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 142 185
PLAZA 3.0 Dicots AT5G40250