AT5G40410

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0016941 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40410
Cluster	HCCA: Cluster_232

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0080156	mitochondrial mRNA modification	IEP	HCCA
BP	GO:1900864	mitochondrial RNA modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	474	597
IPR002885	Pentatricopeptide_repeat	299	347
IPR002885	Pentatricopeptide_repeat	96	144
IPR002885	Pentatricopeptide_repeat	374	399
IPR002885	Pentatricopeptide_repeat	274	296
IPR002885	Pentatricopeptide_repeat	173	195
IPR002885	Pentatricopeptide_repeat	201	228

External Links

PLAZA 3.0 Dicots	AT5G40410