1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G40595

AT5G40595


Description : unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0000208 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G40595
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT3G42140 No alias zinc ion binding;nucleic acid binding 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G25600 No alias BEST Arabidopsis thaliana protein match is: nucleic acid... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G36228 No alias nucleic acid binding;zinc ion binding 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006354 DNA-templated transcription, elongation IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G40595