AT5G40870

Description : uridine kinase/uracil phosphoribosyltransferase 1

Gene families : OG_01_0000819 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40870
Cluster	HCCA: Cluster_79

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	RCA	Interproscan
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004845	uracil phosphoribosyltransferase activity	IGI	Interproscan
MF	GO:0004845	uracil phosphoribosyltransferase activity	ISS	Interproscan
MF	GO:0004849	uridine kinase activity	IDA	Interproscan
MF	GO:0004849	uridine kinase activity	IGI	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006094	gluconeogenesis	RCA	Interproscan
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	None	Extended
BP	GO:0006222	UMP biosynthetic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0008655	pyrimidine-containing compound salvage	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	ISS	Interproscan
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	RCA	Interproscan
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009123	nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009124	nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009129	pyrimidine nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009130	pyrimidine nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009161	ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009173	pyrimidine ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009174	pyrimidine ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	None	Extended
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009616	RNAi-mediated antiviral immune response	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010050	vegetative phase change	RCA	Interproscan
BP	GO:0010138	pyrimidine ribonucleotide salvage	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	RCA	Interproscan
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	posttranscriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
BP	GO:0016441	posttranscriptional gene silencing	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016763	pentosyltransferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
MF	GO:0019205	nucleobase-containing compound kinase activity	None	Extended
MF	GO:0019206	nucleoside kinase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0032262	pyrimidine nucleotide salvage	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043173	nucleotide salvage	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044206	UMP salvage	IDA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0046049	UMP metabolic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0051607	defense response to virus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140546	defense response to symbiont	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:2000904	regulation of starch metabolic process	IMP	Interproscan

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Type	GO Term	Name	Evidence	Source
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEP	HCCA
CC	GO:0000120	RNA polymerase I transcription regulator complex	IEP	HCCA
CC	GO:0000139	Golgi membrane	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
CC	GO:0000932	P-body	IEP	HCCA
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	HCCA
MF	GO:0004814	arginine-tRNA ligase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0007021	tubulin complex assembly	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
CC	GO:0010008	endosome membrane	IEP	HCCA
BP	GO:0010099	regulation of photomorphogenesis	IEP	HCCA
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	HCCA
CC	GO:0012506	vesicle membrane	IEP	HCCA
CC	GO:0016607	nuclear speck	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
MF	GO:0016929	SUMO-specific protease activity	IEP	HCCA
MF	GO:0019104	DNA N-glycosylase activity	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019211	phosphatase activator activity	IEP	HCCA
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	HCCA
CC	GO:0030904	retromer complex	IEP	HCCA
BP	GO:0031425	chloroplast RNA processing	IEP	HCCA
CC	GO:0031902	late endosome membrane	IEP	HCCA
CC	GO:0032585	multivesicular body membrane	IEP	HCCA
CC	GO:0035770	ribonucleoprotein granule	IEP	HCCA
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	HCCA
BP	GO:0043484	regulation of RNA splicing	IEP	HCCA
MF	GO:0043621	protein self-association	IEP	HCCA
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	HCCA
BP	GO:0044770	cell cycle phase transition	IEP	HCCA
BP	GO:0044772	mitotic cell cycle phase transition	IEP	HCCA
BP	GO:0044843	cell cycle G1/S phase transition	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051568	histone H3-K4 methylation	IEP	HCCA
CC	GO:0070860	RNA polymerase I core factor complex	IEP	HCCA
BP	GO:0080009	mRNA methylation	IEP	HCCA
BP	GO:0090351	seedling development	IEP	HCCA
BP	GO:0090435	protein localization to nuclear envelope	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006083	PRK/URK	64	250

External Links

PLAZA 3.0 Dicots	AT5G40870

AT5G40870

Expression Profile

Co-expression Networks

Functional Annotation