AT5G41450

Description : RING/U-box superfamily protein

Gene families : OG_01_0005880 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G41450
Cluster	HCCA: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G05910	No alias	RING/U-box superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003883	CTP synthase activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
BP	GO:0080117	secondary growth	IEP	HCCA
BP	GO:0080190	lateral growth	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	110	152

External Links

PLAZA 3.0 Dicots	AT5G41450