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  5. AT5G42360

AT5G42360


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0009604 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42360
Cluster HCCA: Cluster_162


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005451 monovalent cation:proton antiporter activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015298 solute:cation antiporter activity IEP HCCA
MF GO:0015299 solute:proton antiporter activity IEP HCCA
MF GO:0015386 potassium:proton antiporter activity IEP HCCA
MF GO:0015491 cation:cation antiporter activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0022821 potassium ion antiporter activity IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0048316 seed development IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 363 388
IPR001810 F-box_dom 135 171
PLAZA 3.0 Dicots AT5G42360