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  5. AT5G42660

AT5G42660


Description : Protein of unknown function (DUF616)


Gene families : OG_01_0008826 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008826_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42660
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_23720V3.1 No alias Protein of unknown function (DUF616) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0016757 glycosyltransferase activity ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000145 exocyst IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0004845 uracil phosphoribosyltransferase activity IEP HCCA
MF GO:0004849 uridine kinase activity IEP HCCA
CC GO:0005673 transcription factor TFIIE complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006222 UMP biosynthetic process IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
BP GO:0008655 pyrimidine-containing compound salvage IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0010030 positive regulation of seed germination IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010138 pyrimidine ribonucleotide salvage IEP HCCA
MF GO:0010283 pinoresinol reductase activity IEP HCCA
BP GO:0010387 COP9 signalosome assembly IEP HCCA
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
BP GO:0031425 chloroplast RNA processing IEP HCCA
BP GO:0032262 pyrimidine nucleotide salvage IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0044206 UMP salvage IEP HCCA
BP GO:0044770 cell cycle phase transition IEP HCCA
BP GO:0044772 mitotic cell cycle phase transition IEP HCCA
BP GO:0044843 cell cycle G1/S phase transition IEP HCCA
BP GO:0046049 UMP metabolic process IEP HCCA
BP GO:0046443 FAD metabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0072387 flavin adenine dinucleotide metabolic process IEP HCCA
BP GO:0080050 regulation of seed development IEP HCCA
BP GO:0090435 protein localization to nuclear envelope IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:2000034 regulation of seed maturation IEP HCCA
BP GO:2000904 regulation of starch metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006852 DUF616 161 453
PLAZA 3.0 Dicots AT5G42660