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  5. AT5G42797

AT5G42797


Description : low-molecular-weight cysteine-rich 28


Gene families : OG_01_0000776 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000776_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42797
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT3G20993 No alias low-molecular-weight cysteine-rich 56 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20997 No alias low-molecular-weight cysteine-rich 55 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61182 No alias low-molecular-weight cysteine-rich 54 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09795 No alias low-molecular-weight cysteine-rich 13 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G47075 No alias low-molecular-weight cysteine-rich 20 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G47175 No alias low-molecular-weight cysteine-rich 3 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
CC GO:0031350 intrinsic component of plastid membrane IEP HCCA
CC GO:0031351 integral component of plastid membrane IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR010851 DEFL 29 81
PLAZA 3.0 Dicots AT5G42797