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  5. AT1G24256

AT1G24256


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G35640.1); Has 93 Blast hits to 85 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0001492 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G24256
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT1G06810 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G13280 No alias Putative endonuclease or glycosyl hydrolase 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G35640 No alias Putative endonuclease or glycosyl hydrolase 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000076 DNA replication checkpoint signaling IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G24256