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  5. AT5G44390

AT5G44390


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000138 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44390
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT1G26380 No alias FAD-binding Berberine family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26390 No alias FAD-binding Berberine family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26410 No alias FAD-binding Berberine family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26420 No alias FAD-binding Berberine family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30700 No alias FAD-binding Berberine family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20860 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44380 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated ion channel activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0042937 tripeptide transmembrane transporter activity IEP HCCA
BP GO:0042938 dipeptide transport IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
BP GO:0043200 response to amino acid IEP HCCA
BP GO:0043201 response to leucine IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080052 response to histidine IEP HCCA
BP GO:0080053 response to phenylalanine IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 87 224
IPR012951 BBE 480 538
PLAZA 3.0 Dicots AT5G44390