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  5. AT5G45200

AT5G45200


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG_01_0000936 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000936_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G45200
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT2G17060 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12010 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19510 No alias Disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19530 No alias disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45060 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45230 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
MF GO:0008825 cyclopropane-fatty-acyl-phospholipid synthase activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010067 procambium histogenesis IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010455 positive regulation of cell fate commitment IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0019137 thioglucosidase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045165 cell fate commitment IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
BP GO:0048578 positive regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 219 448
IPR000157 TIR_dom 19 179
IPR011713 Leu-rich_rpt_3 640 659
PLAZA 3.0 Dicots AT5G45200