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  5. AT5G45290

AT5G45290


Description : RING/U-box superfamily protein


Gene families : OG_01_0010167 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G45290
Cluster HCCA: Cluster_242


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
CC GO:0005712 chiasma IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007112 male meiosis cytokinesis IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
MF GO:0008395 steroid hydroxylase activity IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010113 negative regulation of systemic acquired resistance IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010245 radial microtubular system formation IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010480 microsporocyte differentiation IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0018024 histone-lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018345 protein palmitoylation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032390 MutLbeta complex IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033206 meiotic cytokinesis IEP HCCA
MF GO:0033984 indole-3-glycerol-phosphate lyase activity IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0046976 histone methyltransferase activity (H3-K27 specific) IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048533 sporocyte differentiation IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070734 histone H3-K27 methylation IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 489 532
PLAZA 3.0 Dicots AT5G45290