AT5G45890

Description : senescence-associated gene 12

Gene families : OG_01_0002435 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002435_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G45890
Cluster	HCCA: Cluster_30

Type	GO Term	Name	Evidence	Source
CC	GO:0000323	lytic vacuole	None	Extended
CC	GO:0000325	plant-type vacuole	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005773	vacuole	None	Extended
BP	GO:0006508	proteolysis	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007568	aging	IEP	Interproscan
BP	GO:0007568	aging	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	ISS	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010150	leaf senescence	IEP	Interproscan
BP	GO:0010150	leaf senescence	TAS	Interproscan
CC	GO:0010282	senescence-associated vacuole	IDA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090693	plant organ senescence	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	HCCA
MF	GO:0000064	L-ornithine transmembrane transporter activity	IEP	HCCA
BP	GO:0000738	DNA catabolic process, exonucleolytic	IEP	HCCA
MF	GO:0000976	transcription cis-regulatory region binding	IEP	HCCA
MF	GO:0001046	core promoter sequence-specific DNA binding	IEP	HCCA
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	HCCA
BP	GO:0002215	defense response to nematode	IEP	HCCA
BP	GO:0002218	activation of innate immune response	IEP	HCCA
BP	GO:0002253	activation of immune response	IEP	HCCA
BP	GO:0002684	positive regulation of immune system process	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004520	endodeoxyribonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0005290	L-histidine transmembrane transporter activity	IEP	HCCA
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	HCCA
MF	GO:0005476	carnitine:acyl carnitine antiporter activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005615	extracellular space	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006560	proline metabolic process	IEP	HCCA
BP	GO:0006561	proline biosynthetic process	IEP	HCCA
BP	GO:0006878	cellular copper ion homeostasis	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0008300	isoprenoid catabolic process	IEP	HCCA
MF	GO:0008429	phosphatidylethanolamine binding	IEP	HCCA
MF	GO:0008506	sucrose:proton symporter activity	IEP	HCCA
MF	GO:0008970	phospholipase A1 activity	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
MF	GO:0009669	sucrose:cation symporter activity	IEP	HCCA
BP	GO:0009685	gibberellin metabolic process	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010076	maintenance of floral meristem identity	IEP	HCCA
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010223	secondary shoot formation	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
BP	GO:0010254	nectary development	IEP	HCCA
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	HCCA
BP	GO:0010345	suberin biosynthetic process	IEP	HCCA
BP	GO:0010346	shoot axis formation	IEP	HCCA
BP	GO:0010434	bract formation	IEP	HCCA
MF	GO:0010436	carotenoid dioxygenase activity	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015101	organic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015173	aromatic amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015174	basic amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015189	L-lysine transmembrane transporter activity	IEP	HCCA
MF	GO:0015226	carnitine transmembrane transporter activity	IEP	HCCA
MF	GO:0015227	acyl carnitine transmembrane transporter activity	IEP	HCCA
MF	GO:0015651	quaternary ammonium group transmembrane transporter activity	IEP	HCCA
BP	GO:0016101	diterpenoid metabolic process	IEP	HCCA
BP	GO:0016103	diterpenoid catabolic process	IEP	HCCA
BP	GO:0016115	terpenoid catabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016530	metallochaperone activity	IEP	HCCA
MF	GO:0016531	copper chaperone activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	HCCA
MF	GO:0034256	chlorophyll(ide) b reductase activity	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
MF	GO:0043765	T/G mismatch-specific endonuclease activity	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045089	positive regulation of innate immune response	IEP	HCCA
BP	GO:0045487	gibberellin catabolic process	IEP	HCCA
BP	GO:0045490	pectin catabolic process	IEP	HCCA
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	HCCA
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	HCCA
BP	GO:0046339	diacylglycerol metabolic process	IEP	HCCA
BP	GO:0046340	diacylglycerol catabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046461	neutral lipid catabolic process	IEP	HCCA
BP	GO:0046462	monoacylglycerol metabolic process	IEP	HCCA
BP	GO:0046464	acylglycerol catabolic process	IEP	HCCA
BP	GO:0046503	glycerolipid catabolic process	IEP	HCCA
MF	GO:0047372	acylglycerol lipase activity	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048645	animal organ formation	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	HCCA
BP	GO:0050778	positive regulation of immune response	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
MF	GO:0052634	C-19 gibberellin 2-beta-dioxygenase activity	IEP	HCCA
BP	GO:0052651	monoacylglycerol catabolic process	IEP	HCCA
BP	GO:0055070	copper ion homeostasis	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
MF	GO:0072349	modified amino acid transmembrane transporter activity	IEP	HCCA
BP	GO:0080006	internode patterning	IEP	HCCA
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	HCCA
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	HCCA
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0080187	floral organ senescence	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
MF	GO:1901474	azole transmembrane transporter activity	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013201	Prot_inhib_I29	40	96
IPR000668	Peptidase_C1A_C	130	345

External Links

PLAZA 3.0 Dicots	AT5G45890

AT5G45890

Expression Profile

Co-expression Networks

Functional Annotation