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  5. AT5G48500

AT5G48500


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0009671 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48500
Cluster HCCA: Cluster_190


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
CC GO:0000418 RNA polymerase IV complex IEP HCCA
CC GO:0000419 RNA polymerase V complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0003156 regulation of animal organ formation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008195 phosphatidate phosphatase activity IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010052 guard cell differentiation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010158 abaxial cell fate specification IEP HCCA
BP GO:0010160 formation of animal organ boundary IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010426 DNA methylation on cytosine within a CHH sequence IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022403 cell cycle phase IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0044770 cell cycle phase transition IEP HCCA
BP GO:0044772 mitotic cell cycle phase transition IEP HCCA
BP GO:0044843 cell cycle G1/S phase transition IEP HCCA
BP GO:0044848 biological phase IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048480 stigma development IEP HCCA
BP GO:0048504 regulation of timing of animal organ formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051325 interphase IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000027 regulation of animal organ morphogenesis IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G48500