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  5. AT5G48640

AT5G48640


Description : Cyclin family protein


Gene families : OG_01_0002364 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48640
Cluster HCCA: Cluster_230


Type GO Term Name Evidence Source
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000210 NAD+ diphosphatase activity IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0002215 defense response to nematode IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004301 epoxide hydrolase activity IEP HCCA
MF GO:0004551 nucleotide diphosphatase activity IEP HCCA
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP HCCA
MF GO:0004679 AMP-activated protein kinase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006195 purine nucleotide catabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity IEP HCCA
BP GO:0009154 purine ribonucleotide catabolic process IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009261 ribonucleotide catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009503 thylakoid light-harvesting complex IEP HCCA
CC GO:0009517 PSII associated light-harvesting complex II IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010117 photoprotection IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
MF GO:0010328 auxin influx transmembrane transporter activity IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0010942 positive regulation of cell death IEP HCCA
MF GO:0010945 CoA pyrophosphatase activity IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016122 xanthophyll metabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016794 diphosphoric monoester hydrolase activity IEP HCCA
MF GO:0016801 hydrolase activity, acting on ether bonds IEP HCCA
MF GO:0016803 ether hydrolase activity IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0032055 negative regulation of translation in response to stress IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032928 regulation of superoxide anion generation IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033869 nucleoside bisphosphate catabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034031 ribonucleoside bisphosphate catabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034034 purine nucleoside bisphosphate catabolic process IEP HCCA
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP HCCA
BP GO:0034249 negative regulation of cellular amide metabolic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043068 positive regulation of programmed cell death IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043555 regulation of translation in response to stress IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0044703 multi-organism reproductive process IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0045892 negative regulation of transcription, DNA-templated IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048497 maintenance of floral organ identity IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0080149 sucrose induced translational repression IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0090322 regulation of superoxide metabolic process IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090700 maintenance of plant organ identity IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900407 regulation of cellular response to oxidative stress IEP HCCA
BP GO:1901031 regulation of response to reactive oxygen species IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1902882 regulation of response to oxidative stress IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000121 regulation of removal of superoxide radicals IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000652 regulation of secondary cell wall biogenesis IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
BP GO:2001293 malonyl-CoA metabolic process IEP HCCA
BP GO:2001294 malonyl-CoA catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 45 142
PLAZA 3.0 Dicots AT5G48640