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  5. AT5G48770

AT5G48770


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG_01_0000012 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48770
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G63730 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16957 No alias No description available 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_1030V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
CC GO:0000407 phagophore assembly site IEP HCCA
MF GO:0003837 beta-ureidopropionase activity IEP HCCA
MF GO:0004321 fatty-acyl-CoA synthase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
MF GO:0005432 calcium:sodium antiporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006208 pyrimidine nucleobase catabolic process IEP HCCA
BP GO:0006212 uracil catabolic process IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006517 protein deglycosylation IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015368 calcium:cation antiporter activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
MF GO:0016207 4-coumarate-CoA ligase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016408 C-acyltransferase activity IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016882 cyclo-ligase activity IEP HCCA
BP GO:0019860 uracil metabolic process IEP HCCA
MF GO:0030272 5-formyltetrahydrofolate cyclo-ligase activity IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
BP GO:0034196 acylglycerol transport IEP HCCA
CC GO:0034399 nuclear periphery IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
BP GO:0043393 regulation of protein binding IEP HCCA
BP GO:0043496 regulation of protein homodimerization activity IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0046113 nucleobase catabolic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
BP GO:0051098 regulation of binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:1901965 endoplasmic reticulum to chloroplast transport IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
BP GO:1990052 ER to chloroplast lipid transport IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 13 188
IPR002182 NB-ARC 190 427
IPR011713 Leu-rich_rpt_3 606 623
PLAZA 3.0 Dicots AT5G48770