1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G49490

AT5G49490


Description : AGAMOUS-like 83


Gene families : OG_01_0001056 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49490

Target Alias Description ECC score Gene Family Method Actions
AT1G46408 No alias AGAMOUS-like 97 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G48150 No alias MADS-box transcription factor family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50780 No alias 2Fe-2S ferredoxin-like superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G12510 No alias MADS-box family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G27130 No alias AGAMOUS-like 39 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38620 No alias MADS-box transcription factor family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G49420 No alias MADS-box transcription factor family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 54 94
PLAZA 3.0 Dicots AT5G49490