AT1G25280

Description : tubby like protein 10

Gene families : OG_01_0000361 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G25280
Cluster	HCCA: Cluster_217

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c23_17890V3.1	No alias	tubby like protein 3	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_19540V3.1	No alias	tubby like protein 3	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	None	Extended
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	RCA	Interproscan
MF	GO:0008081	phosphoric diester hydrolase activity	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010359	regulation of anion channel activity	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022898	regulation of transmembrane transporter activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032409	regulation of transporter activity	None	Extended
BP	GO:0032412	regulation of ion transmembrane transporter activity	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043090	amino acid import	RCA	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0044070	regulation of anion transport	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903959	regulation of anion transmembrane transport	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0000303	response to superoxide	IEP	HCCA
BP	GO:0000305	response to oxygen radical	IEP	HCCA
MF	GO:0001664	G protein-coupled receptor binding	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0004140	dephospho-CoA kinase activity	IEP	HCCA
MF	GO:0004362	glutathione-disulfide reductase (NADPH) activity	IEP	HCCA
MF	GO:0004448	isocitrate dehydrogenase activity	IEP	HCCA
MF	GO:0004449	isocitrate dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0004846	urate oxidase activity	IEP	HCCA
MF	GO:0005095	GTPase inhibitor activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006102	isocitrate metabolic process	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0006301	postreplication repair	IEP	HCCA
BP	GO:0006558	L-phenylalanine metabolic process	IEP	HCCA
BP	GO:0006570	tyrosine metabolic process	IEP	HCCA
BP	GO:0006571	tyrosine biosynthetic process	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006820	anion transport	IEP	HCCA
BP	GO:0006828	manganese ion transport	IEP	HCCA
BP	GO:0006862	nucleotide transport	IEP	HCCA
BP	GO:0006882	cellular zinc ion homeostasis	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0007188	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	HCCA
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009645	response to low light intensity stimulus	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010036	response to boron-containing substance	IEP	HCCA
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0010244	response to low fluence blue light stimulus by blue low-fluence system	IEP	HCCA
BP	GO:0010271	regulation of chlorophyll catabolic process	IEP	HCCA
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	HCCA
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
CC	GO:0012505	endomembrane system	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0015038	glutathione disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015175	neutral amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015193	L-proline transmembrane transporter activity	IEP	HCCA
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0015368	calcium:cation antiporter activity	IEP	HCCA
MF	GO:0015369	calcium:proton antiporter activity	IEP	HCCA
BP	GO:0015691	cadmium ion transport	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015802	basic amino acid transport	IEP	HCCA
BP	GO:0015804	neutral amino acid transport	IEP	HCCA
BP	GO:0015824	proline transport	IEP	HCCA
BP	GO:0015853	adenine transport	IEP	HCCA
BP	GO:0015854	guanine transport	IEP	HCCA
BP	GO:0015936	coenzyme A metabolic process	IEP	HCCA
BP	GO:0015937	coenzyme A biosynthetic process	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016247	channel regulator activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	HCCA
MF	GO:0016663	oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
CC	GO:0019897	extrinsic component of plasma membrane	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
CC	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0045827	negative regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:0047134	protein-disulfide reductase (NAD(P)) activity	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	HCCA
MF	GO:0051139	metal ion:proton antiporter activity	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0055069	zinc ion homeostasis	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	HCCA
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	HCCA
BP	GO:0071396	cellular response to lipid	IEP	HCCA
BP	GO:0071483	cellular response to blue light	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0080029	cellular response to boron-containing substance levels	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080169	cellular response to boron-containing substance deprivation	IEP	HCCA
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	HCCA
BP	GO:0090359	negative regulation of abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0097306	cellular response to alcohol	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	HCCA
BP	GO:1901404	regulation of tetrapyrrole catabolic process	IEP	HCCA
BP	GO:1901420	negative regulation of response to alcohol	IEP	HCCA
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	HCCA
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	HCCA
BP	GO:1902652	secondary alcohol metabolic process	IEP	HCCA
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	HCCA
BP	GO:1902931	negative regulation of alcohol biosynthetic process	IEP	HCCA
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	58	111
IPR000007	Tubby_C	122	440

External Links

PLAZA 3.0 Dicots	AT1G25280

AT1G25280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation