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AT5G50550


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001088 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G50550
Cluster HCCA: Cluster_408


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015298 solute:cation antiporter activity IEP HCCA
MF GO:0015491 cation:cation antiporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0080120 CAAX-box protein maturation IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 147 169
PLAZA 3.0 Dicots AT5G50550