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  5. AT5G51080

AT5G51080


Description : RNase H family protein


Gene families : OG_01_0002234 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G51080
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cre06.g272550 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP HCCA
MF GO:0004413 homoserine kinase activity IEP HCCA
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005046 KDEL sequence binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006481 C-terminal protein methylation IEP HCCA
BP GO:0006513 protein monoubiquitination IEP HCCA
BP GO:0006566 threonine metabolic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006884 cell volume homeostasis IEP HCCA
MF GO:0008022 protein C-terminus binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009088 threonine biosynthetic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
MF GO:0010340 carboxyl-O-methyltransferase activity IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
BP GO:0018410 C-terminal protein amino acid modification IEP HCCA
MF GO:0019202 amino acid kinase activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030332 cyclin binding IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 190 311
PLAZA 3.0 Dicots AT5G51080