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  5. AT5G51980

AT5G51980


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0002050 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G51980
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Zci_03488.1 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
BP GO:0000354 cis assembly of pre-catalytic spliceosome IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004623 phospholipase A2 activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0004709 MAP kinase kinase kinase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005344 oxygen carrier activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005686 U2 snRNP IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009643 photosynthetic acclimation IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
MF GO:0009973 adenylyl-sulfate reductase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
BP GO:0010449 root meristem growth IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
CC GO:0015030 Cajal body IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015669 gas transport IEP HCCA
BP GO:0015671 oxygen transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016629 12-oxophytodienoate reductase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0022622 root system development IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0043200 response to amino acid IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045739 positive regulation of DNA repair IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0047893 flavonol 3-O-glucosyltransferase activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051552 flavone metabolic process IEP HCCA
BP GO:0051553 flavone biosynthetic process IEP HCCA
BP GO:0051554 flavonol metabolic process IEP HCCA
BP GO:0051555 flavonol biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0055089 fatty acid homeostasis IEP HCCA
BP GO:0055090 acylglycerol homeostasis IEP HCCA
BP GO:0055091 phospholipid homeostasis IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070328 triglyceride homeostasis IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP HCCA
MF GO:0071617 lysophospholipid acyltransferase activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0071782 endoplasmic reticulum tubular network IEP HCCA
BP GO:0071786 endoplasmic reticulum tubular network organization IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
BP GO:0080050 regulation of seed development IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0098754 detoxification IEP HCCA
CC GO:0098827 endoplasmic reticulum subcompartment IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902065 response to L-glutamate IEP HCCA
BP GO:2000034 regulation of seed maturation IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000693 positive regulation of seed maturation IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 305 339
IPR001680 WD40_repeat 143 179
IPR001680 WD40_repeat 265 300
PLAZA 3.0 Dicots AT5G51980