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  5. AT5G52090

AT5G52090


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_01_0000898 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52090
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT1G65780 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G37160 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
CC GO:0008076 voltage-gated potassium channel complex IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0009875 pollen-pistil interaction IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019478 D-amino acid catabolic process IEP HCCA
BP GO:0032877 positive regulation of DNA endoreduplication IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034705 potassium channel complex IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045740 positive regulation of DNA replication IEP HCCA
BP GO:0046416 D-amino acid metabolic process IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
BP GO:2000105 positive regulation of DNA-dependent DNA replication IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G52090