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  5. AT5G52360

AT5G52360


Description : actin depolymerizing factor 10


Gene families : OG_01_0000446 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52360
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre07.g339050 No alias Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g20570.1 No alias actin-depolymerizing factor 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005884 actin filament IDA Interproscan
CC GO:0048046 apoplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005938 cell cortex IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007204 positive regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009865 pollen tube adhesion IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0017157 regulation of exocytosis IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0035023 regulation of Rho protein signal transduction IEP HCCA
BP GO:0035024 negative regulation of Rho protein signal transduction IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0044703 multi-organism reproductive process IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046580 negative regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0050848 regulation of calcium-mediated signaling IEP HCCA
BP GO:0050850 positive regulation of calcium-mediated signaling IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051046 regulation of secretion IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051058 negative regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051648 vesicle localization IEP HCCA
BP GO:0051650 establishment of vesicle localization IEP HCCA
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0060627 regulation of vesicle-mediated transport IEP HCCA
CC GO:0070382 exocytic vesicle IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098609 cell-cell adhesion IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0099503 secretory vesicle IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902533 positive regulation of intracellular signal transduction IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1903530 regulation of secretion by cell IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 14 134
PLAZA 3.0 Dicots AT5G52360