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  5. AT5G52620

AT5G52620


Description : F-box associated ubiquitination effector family protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52620
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30920 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30925 No alias phospholipase Cs 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30930 No alias F-box family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31080 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090 No alias F-box family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52495 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53790 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53815 No alias F-box family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060 No alias F-box family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02660 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02890 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49450 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G56890 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22791 No alias F-box family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44220 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 200 333
PLAZA 3.0 Dicots AT5G52620