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  5. AT5G52680

AT5G52680


Description : Copper transport protein family


Gene families : OG_01_0000682 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52680

Target Alias Description ECC score Gene Family Method Actions
AT5G52670 No alias Copper transport protein family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52700 No alias Copper transport protein family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52720 No alias Copper transport protein family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52730 No alias Copper transport protein family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52740 No alias Copper transport protein family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52750 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52770 No alias Copper transport protein family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0046872 metal ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009270 response to humidity IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010185 regulation of cellular defense response IEP HCCA
BP GO:0010186 positive regulation of cellular defense response IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019433 triglyceride catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034249 negative regulation of cellular amide metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0045793 positive regulation of cell size IEP HCCA
BP GO:0045947 negative regulation of translational initiation IEP HCCA
BP GO:0046461 neutral lipid catabolic process IEP HCCA
BP GO:0046464 acylglycerol catabolic process IEP HCCA
BP GO:0046503 glycerolipid catabolic process IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051552 flavone metabolic process IEP HCCA
BP GO:0051553 flavone biosynthetic process IEP HCCA
BP GO:0051554 flavonol metabolic process IEP HCCA
BP GO:0051555 flavonol biosynthetic process IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052545 callose localization IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
MF GO:0080046 quercetin 4'-O-glucosyltransferase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G52680