1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G25682

AT1G25682


Description : Family of unknown function (DUF572)


Gene families : OG_01_0006109 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006109_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G25682
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
Mp5g17690.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004448 isocitrate dehydrogenase activity IEP HCCA
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004644 phosphoribosylglycinamide formyltransferase activity IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009268 response to pH IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0010084 specification of animal organ axis polarity IEP HCCA
BP GO:0010161 red light signaling pathway IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010447 response to acidic pH IEP HCCA
MF GO:0010542 nitrate efflux transmembrane transporter activity IEP HCCA
MF GO:0015513 high-affinity secondary active nitrite transmembrane transporter activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016629 12-oxophytodienoate reductase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0071491 cellular response to red light IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000025 regulation of leaf formation IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR007590 Saf4/Yju2 13 278
PLAZA 3.0 Dicots AT1G25682