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  5. AT5G53110

AT5G53110


Description : RING/U-box superfamily protein


Gene families : OG_01_0003156 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53110
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT2G46495 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006865 amino acid transport RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004566 beta-glucuronidase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 cellular biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007584 response to nutrient IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
MF GO:0031386 protein tag IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0044070 regulation of anion transport IEP HCCA
BP GO:0044106 cellular amine metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046218 indolalkylamine catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0098754 detoxification IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1903959 regulation of anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR032872 WAK_assoc_C 169 233
IPR001841 Znf_RING 329 372
IPR025287 WAK_GUB 42 133
PLAZA 3.0 Dicots AT5G53110