1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G53270

AT5G53270


Description : Seed maturation protein


Gene families : OG_01_0000769 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53270
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Mp5g18240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_200V3.1 No alias Seed maturation protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007275 multicellular organism development ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
MF GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004303 estradiol 17-beta-dehydrogenase activity IEP HCCA
MF GO:0004462 lactoylglutathione lyase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010187 negative regulation of seed germination IEP HCCA
BP GO:0010344 seed oilbody biogenesis IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016145 S-glycoside catabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016595 glutamate binding IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
BP GO:0019430 removal of superoxide radicals IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
MF GO:0030611 arsenate reductase activity IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
CC GO:0042807 central vacuole IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050898 nitrile metabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA
MF GO:0072555 17-beta-ketosteroid reductase activity IEP HCCA
MF GO:0072582 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA
BP GO:0080028 nitrile biosynthetic process IEP HCCA
BP GO:0098869 cellular oxidant detoxification IEP HCCA
BP GO:1990748 cellular detoxification IEP HCCA
InterPro domains Description Start Stop
IPR007011 LEA_SMP_dom 96 151
IPR007011 LEA_SMP_dom 30 87
PLAZA 3.0 Dicots AT5G53270