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  5. AT5G53790

AT5G53790


Description : Protein of unknown function (DUF295)


Gene families : OG_01_0000121 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53790
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT3G43170 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G53240 No alias Protein of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G55440 No alias Protein of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP HCCA
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005763 mitochondrial small ribosomal subunit IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010023 proanthocyanidin biosynthetic process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016707 gibberellin 3-beta-dioxygenase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
CC GO:0043076 megasporocyte nucleus IEP HCCA
CC GO:0043078 polar nucleus IEP HCCA
MF GO:0045544 gibberellin 20-oxidase activity IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0048317 seed morphogenesis IEP HCCA
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070529 L-tryptophan aminotransferase activity IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
BP GO:0080022 primary root development IEP HCCA
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP HCCA
BP GO:0080113 regulation of seed growth IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:2000014 regulation of endosperm development IEP HCCA
InterPro domains Description Start Stop
IPR005174 DUF295 298 341
PLAZA 3.0 Dicots AT5G53790