- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 104 Blast hits to 102 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Gene families : OG_01_0000792 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000792_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G54148 | |
| Cluster | HCCA: Cluster_318 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zci_01859.1 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| CC | GO:0000785 | chromatin | IEP | HCCA |
| CC | GO:0000808 | origin recognition complex | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003713 | transcription coactivator activity | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008474 | palmitoyl-(protein) hydrolase activity | IEP | HCCA |
| BP | GO:0009566 | fertilization | IEP | HCCA |
| BP | GO:0009567 | double fertilization forming a zygote and endosperm | IEP | HCCA |
| BP | GO:0009873 | ethylene-activated signaling pathway | IEP | HCCA |
| CC | GO:0009898 | cytoplasmic side of plasma membrane | IEP | HCCA |
| BP | GO:0010098 | suspensor development | IEP | HCCA |
| BP | GO:0010466 | negative regulation of peptidase activity | IEP | HCCA |
| BP | GO:0010951 | negative regulation of endopeptidase activity | IEP | HCCA |
| MF | GO:0015204 | urea transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015840 | urea transport | IEP | HCCA |
| BP | GO:0019755 | one-carbon compound transport | IEP | HCCA |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | HCCA |
| BP | GO:0030154 | cell differentiation | IEP | HCCA |
| BP | GO:0030162 | regulation of proteolysis | IEP | HCCA |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0045861 | negative regulation of proteolysis | IEP | HCCA |
| BP | GO:0048235 | pollen sperm cell differentiation | IEP | HCCA |
| CC | GO:0048555 | generative cell nucleus | IEP | HCCA |
| BP | GO:0048598 | embryonic morphogenesis | IEP | HCCA |
| BP | GO:0048869 | cellular developmental process | IEP | HCCA |
| BP | GO:0051346 | negative regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0051865 | protein autoubiquitination | IEP | HCCA |
| BP | GO:0052547 | regulation of peptidase activity | IEP | HCCA |
| BP | GO:0052548 | regulation of endopeptidase activity | IEP | HCCA |
| BP | GO:0080159 | zygote elongation | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0098552 | side of membrane | IEP | HCCA |
| CC | GO:0098562 | cytoplasmic side of membrane | IEP | HCCA |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT5G54148 |