AT1G26310


Description : K-box region and MADS-box transcription factor family protein


Gene families : OG_01_0000131 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G26310
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G24260 No alias K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G45650 No alias AGAMOUS-like 6 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G02310 No alias K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15800 No alias K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G60910 No alias AGAMOUS-like 8 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62165 No alias AGAMOUS-like 42 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre11.g467577 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity TAS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009911 positive regulation of flower development TAS Interproscan
BP GO:0010048 vernalization response RCA Interproscan
BP GO:0010582 floral meristem determinacy IEP Interproscan
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light RCA Interproscan
BP GO:0048440 carpel development RCA Interproscan
BP GO:0048443 stamen development RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010076 maintenance of floral meristem identity IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010321 regulation of vegetative phase change IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043934 sporulation IEP HCCA
MF GO:0045431 flavonol synthase activity IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 85 174
PLAZA 3.0 Dicots AT1G26310