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  5. AT5G55730

AT5G55730


Description : FASCICLIN-like arabinogalactan 1


Gene families : OG_01_0000405 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55730
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AT2G24450 No alias FASCICLIN-like arabinogalactan protein 3 precursor 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12730 No alias FASCICLIN-like arabinogalactan 2 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g03130.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_5590V3.1 No alias Fasciclin-like arabinogalactan family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
CC GO:0046658 anchored component of plasma membrane IDA Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048367 shoot system development IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004563 beta-N-acetylhexosaminidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009786 regulation of asymmetric cell division IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010160 formation of animal organ boundary IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015929 hexosaminidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0018454 acetoacetyl-CoA reductase activity IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030139 endocytic vesicle IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
MF GO:0045703 ketoreductase activity IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048497 maintenance of floral organ identity IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090700 maintenance of plant organ identity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 36 103
IPR000782 FAS1_domain 203 325
PLAZA 3.0 Dicots AT5G55730