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  5. AT1G26400

AT1G26400


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000138 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G26400
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AT1G26390 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30700 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G34810 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20820 No alias FAD-binding Berberine family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44360 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g25840.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004303 estradiol 17-beta-dehydrogenase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004462 lactoylglutathione lyase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010344 seed oilbody biogenesis IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016145 S-glycoside catabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016595 glutamate binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0019430 removal of superoxide radicals IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
CC GO:0042807 central vacuole IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048700 acquisition of desiccation tolerance in seed IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050898 nitrile metabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071614 linoleic acid epoxygenase activity IEP HCCA
MF GO:0072555 17-beta-ketosteroid reductase activity IEP HCCA
MF GO:0072582 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA
BP GO:0080028 nitrile biosynthetic process IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0097439 acquisition of desiccation tolerance IEP HCCA
BP GO:0098869 cellular oxidant detoxification IEP HCCA
BP GO:1990748 cellular detoxification IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
InterPro domains Description Start Stop
IPR012951 BBE 468 521
IPR006094 Oxid_FAD_bind_N 79 213
PLAZA 3.0 Dicots AT1G26400