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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_01_0009620 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G57250 | |
| Cluster | HCCA: Cluster_162 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004644 | phosphoribosylglycinamide formyltransferase activity | IEP | HCCA |
| MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | HCCA |
| MF | GO:0005432 | calcium:sodium antiporter activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | HCCA |
| MF | GO:0008864 | formyltetrahydrofolate deformylase activity | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009560 | embryo sac egg cell differentiation | IEP | HCCA |
| MF | GO:0015085 | calcium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015368 | calcium:cation antiporter activity | IEP | HCCA |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | HCCA |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
| MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | HCCA |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| CC | GO:0034399 | nuclear periphery | IEP | HCCA |
| BP | GO:0035725 | sodium ion transmembrane transport | IEP | HCCA |
| BP | GO:0040034 | regulation of development, heterochronic | IEP | HCCA |
| BP | GO:0045116 | protein neddylation | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046982 | protein heterodimerization activity | IEP | HCCA |
| BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | HCCA |
| BP | GO:0048509 | regulation of meristem development | IEP | HCCA |
| BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 826 | 856 |
| IPR002885 | Pentatricopeptide_repeat | 517 | 540 |
| IPR002885 | Pentatricopeptide_repeat | 653 | 677 |
| IPR002885 | Pentatricopeptide_repeat | 758 | 807 |
| IPR002885 | Pentatricopeptide_repeat | 171 | 219 |
| IPR002885 | Pentatricopeptide_repeat | 276 | 324 |
| IPR002885 | Pentatricopeptide_repeat | 446 | 494 |
| IPR002885 | Pentatricopeptide_repeat | 689 | 737 |
| IPR002885 | Pentatricopeptide_repeat | 346 | 393 |
| IPR002885 | Pentatricopeptide_repeat | 595 | 617 |
| IPR002885 | Pentatricopeptide_repeat | 136 | 165 |
| PLAZA 3.0 Dicots | AT5G57250 |