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  5. AT5G58100

AT5G58100


Description : unknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG_01_0007202 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G58100
Cluster HCCA: Cluster_101


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0010584 pollen exine formation IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009720 detection of hormone stimulus IEP HCCA
BP GO:0009726 detection of endogenous stimulus IEP HCCA
BP GO:0009727 detection of ethylene stimulus IEP HCCA
BP GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0016602 CCAAT-binding factor complex IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022403 cell cycle phase IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042401 cellular biogenic amine biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
BP GO:0044848 biological phase IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051322 anaphase IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0051704 multi-organism process IEP HCCA
MF GO:0051740 ethylene binding IEP HCCA
MF GO:0051990 (R)-2-hydroxyglutarate dehydrogenase activity IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052482 defense response by cell wall thickening IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052544 defense response by callose deposition in cell wall IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0072328 alkene binding IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0090436 leaf pavement cell development IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G58100