AT5G59420

Description : OSBP(oxysterol binding protein)-related protein 3C

Gene families : OG_01_0002682 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002682_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G59420
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre03.g199759	No alias	Oxysterol-binding protein-related protein 3A...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005496	steroid binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
MF	GO:0008142	oxysterol binding	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	ISS	Interproscan
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009608	response to symbiont	None	Extended
BP	GO:0009610	response to symbiotic fungus	RCA	Interproscan
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
BP	GO:0009696	salicylic acid metabolic process	None	Extended
BP	GO:0009697	salicylic acid biosynthetic process	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0032934	sterol binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0042542	response to hydrogen peroxide	RCA	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	RCA	Interproscan
BP	GO:0046189	phenol-containing compound biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046482	para-aminobenzoic acid metabolic process	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000775	chromosome, centromeric region	IEP	HCCA
CC	GO:0000781	chromosome, telomeric region	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	HCCA
MF	GO:0003958	NADPH-hemoprotein reductase activity	IEP	HCCA
MF	GO:0004300	enoyl-CoA hydratase activity	IEP	HCCA
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0004430	1-phosphatidylinositol 4-kinase activity	IEP	HCCA
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	HCCA
MF	GO:0005047	signal recognition particle binding	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
MF	GO:0005457	GDP-fucose transmembrane transporter activity	IEP	HCCA
MF	GO:0005459	UDP-galactose transmembrane transporter activity	IEP	HCCA
MF	GO:0005460	UDP-glucose transmembrane transporter activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	HCCA
BP	GO:0006491	N-glycan processing	IEP	HCCA
BP	GO:0006493	protein O-linked glycosylation	IEP	HCCA
BP	GO:0006517	protein deglycosylation	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
BP	GO:0006954	inflammatory response	IEP	HCCA
MF	GO:0008061	chitin binding	IEP	HCCA
MF	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IEP	HCCA
BP	GO:0009100	glycoprotein metabolic process	IEP	HCCA
CC	GO:0009331	glycerol-3-phosphate dehydrogenase complex	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009704	de-etiolation	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	HCCA
BP	GO:0009868	jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	IEP	HCCA
CC	GO:0009897	external side of plasma membrane	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
BP	GO:0010921	regulation of phosphatase activity	IEP	HCCA
BP	GO:0010959	regulation of metal ion transport	IEP	HCCA
MF	GO:0015105	arsenite transmembrane transporter activity	IEP	HCCA
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0015700	arsenite transport	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015783	GDP-fucose transmembrane transport	IEP	HCCA
BP	GO:0015786	UDP-glucose transmembrane transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016208	AMP binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016508	long-chain-enoyl-CoA hydratase activity	IEP	HCCA
MF	GO:0016653	oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019212	phosphatase inhibitor activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	HCCA
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	HCCA
CC	GO:0032592	integral component of mitochondrial membrane	IEP	HCCA
BP	GO:0032784	regulation of DNA-templated transcription, elongation	IEP	HCCA
BP	GO:0033609	oxalate metabolic process	IEP	HCCA
BP	GO:0033611	oxalate catabolic process	IEP	HCCA
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	HCCA
MF	GO:0036080	purine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
BP	GO:0043132	NAD transport	IEP	HCCA
BP	GO:0043270	positive regulation of ion transport	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0043434	response to peptide hormone	IEP	HCCA
BP	GO:0043649	dicarboxylic acid catabolic process	IEP	HCCA
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0046854	phosphatidylinositol phosphate biosynthetic process	IEP	HCCA
MF	GO:0047952	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity	IEP	HCCA
BP	GO:0048358	mucilage pectin biosynthetic process	IEP	HCCA
BP	GO:0048363	mucilage pectin metabolic process	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
MF	GO:0050203	oxalate-CoA ligase activity	IEP	HCCA
BP	GO:0050826	response to freezing	IEP	HCCA
BP	GO:0051050	positive regulation of transport	IEP	HCCA
MF	GO:0051724	NAD transmembrane transporter activity	IEP	HCCA
BP	GO:0051924	regulation of calcium ion transport	IEP	HCCA
BP	GO:0051928	positive regulation of calcium ion transport	IEP	HCCA
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	HCCA
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	HCCA
BP	GO:0052646	alditol phosphate metabolic process	IEP	HCCA
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	HCCA
BP	GO:0060416	response to growth hormone	IEP	HCCA
BP	GO:0071216	cellular response to biotic stimulus	IEP	HCCA
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	HCCA
BP	GO:0071323	cellular response to chitin	IEP	HCCA
BP	GO:0071417	cellular response to organonitrogen compound	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072334	UDP-galactose transmembrane transport	IEP	HCCA
BP	GO:0080148	negative regulation of response to water deprivation	IEP	HCCA
BP	GO:0080163	regulation of protein serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0080170	hydrogen peroxide transmembrane transport	IEP	HCCA
BP	GO:0090480	purine nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	HCCA
CC	GO:0098552	side of membrane	IEP	HCCA
CC	GO:0098687	chromosomal region	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
BP	GO:1901652	response to peptide	IEP	HCCA
BP	GO:2000070	regulation of response to water deprivation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000648	Oxysterol-bd	69	422

External Links

PLAZA 3.0 Dicots	AT5G59420

AT5G59420

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation