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  5. AT5G60560

AT5G60560


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000007 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60560
Cluster HCCA: Cluster_417

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32140 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50470 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17500 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17620 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G18330 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G21165 No alias No description available 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G21170 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0045544 gibberellin 20-oxidase activity IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 42
IPR006527 F-box-assoc_dom_typ1 195 353
PLAZA 3.0 Dicots AT5G60560