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  5. AT5G60580

AT5G60580


Description : RING/U-box superfamily protein


Gene families : OG_01_0001999 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60580
Cluster HCCA: Cluster_345


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000255 allantoin metabolic process IEP HCCA
BP GO:0000256 allantoin catabolic process IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP HCCA
MF GO:0004801 transaldolase activity IEP HCCA
MF GO:0004848 ureidoglycolate hydrolase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006145 purine nucleobase catabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010135 ureide metabolic process IEP HCCA
BP GO:0010136 ureide catabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0015645 fatty acid ligase activity IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019048 modulation by virus of host process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032890 regulation of organic acid transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035821 modulation of process of other organism IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043605 cellular amide catabolic process IEP HCCA
BP GO:0044003 modulation by symbiont of host process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0046113 nucleobase catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0051817 modulation of process of other organism involved in symbiotic interaction IEP HCCA
BP GO:0051952 regulation of amine transport IEP HCCA
BP GO:0051955 regulation of amino acid transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0080143 regulation of amino acid export IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903789 regulation of amino acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 257 304
PLAZA 3.0 Dicots AT5G60580