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Description : BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Gene families : OG_01_0011994 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G61120 | |
| Cluster | HCCA: Cluster_116 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000419 | RNA polymerase V complex | IEP | HCCA |
| BP | GO:0002237 | response to molecule of bacterial origin | IEP | HCCA |
| BP | GO:0003002 | regionalization | IEP | HCCA |
| BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005665 | RNA polymerase II, core complex | IEP | HCCA |
| BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006333 | chromatin assembly or disassembly | IEP | HCCA |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | HCCA |
| BP | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | IEP | HCCA |
| BP | GO:0007389 | pattern specification process | IEP | HCCA |
| BP | GO:0008360 | regulation of cell shape | IEP | HCCA |
| MF | GO:0008810 | cellulase activity | IEP | HCCA |
| BP | GO:0009653 | anatomical structure morphogenesis | IEP | HCCA |
| BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
| BP | GO:0009791 | post-embryonic development | IEP | HCCA |
| BP | GO:0009886 | post-embryonic animal morphogenesis | IEP | HCCA |
| BP | GO:0009888 | tissue development | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009908 | flower development | IEP | HCCA |
| BP | GO:0009909 | regulation of flower development | IEP | HCCA |
| BP | GO:0010047 | fruit dehiscence | IEP | HCCA |
| BP | GO:0010093 | specification of floral organ identity | IEP | HCCA |
| BP | GO:0010103 | stomatal complex morphogenesis | IEP | HCCA |
| BP | GO:0010160 | formation of animal organ boundary | IEP | HCCA |
| CC | GO:0010169 | thioglucosidase complex | IEP | HCCA |
| MF | GO:0010180 | thioglucosidase binding | IEP | HCCA |
| BP | GO:0010234 | anther wall tapetum cell fate specification | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0019199 | transmembrane receptor protein kinase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0022414 | reproductive process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| BP | GO:0034599 | cellular response to oxidative stress | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| CC | GO:0042645 | mitochondrial nucleoid | IEP | HCCA |
| BP | GO:0048316 | seed development | IEP | HCCA |
| BP | GO:0048437 | floral organ development | IEP | HCCA |
| BP | GO:0048440 | carpel development | IEP | HCCA |
| BP | GO:0048441 | petal development | IEP | HCCA |
| BP | GO:0048443 | stamen development | IEP | HCCA |
| BP | GO:0048444 | floral organ morphogenesis | IEP | HCCA |
| BP | GO:0048446 | petal morphogenesis | IEP | HCCA |
| BP | GO:0048449 | floral organ formation | IEP | HCCA |
| BP | GO:0048451 | petal formation | IEP | HCCA |
| BP | GO:0048453 | sepal formation | IEP | HCCA |
| BP | GO:0048481 | plant ovule development | IEP | HCCA |
| BP | GO:0048507 | meristem development | IEP | HCCA |
| BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
| BP | GO:0048608 | reproductive structure development | IEP | HCCA |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
| BP | GO:0048827 | phyllome development | IEP | HCCA |
| BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
| BP | GO:0048856 | anatomical structure development | IEP | HCCA |
| BP | GO:0048859 | formation of anatomical boundary | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0051131 | chaperone-mediated protein complex assembly | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051259 | protein complex oligomerization | IEP | HCCA |
| BP | GO:0051260 | protein homooligomerization | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0070407 | oxidation-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0080051 | cutin transport | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0080154 | regulation of fertilization | IEP | HCCA |
| BP | GO:0080155 | regulation of double fertilization forming a zygote and endosperm | IEP | HCCA |
| BP | GO:0080172 | petal epidermis patterning | IEP | HCCA |
| BP | GO:0090567 | reproductive shoot system development | IEP | HCCA |
| BP | GO:0090626 | plant epidermis morphogenesis | IEP | HCCA |
| BP | GO:0090697 | post-embryonic plant organ morphogenesis | IEP | HCCA |
| BP | GO:0090698 | post-embryonic plant morphogenesis | IEP | HCCA |
| BP | GO:0090701 | specification of plant organ identity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0099402 | plant organ development | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1900376 | regulation of secondary metabolite biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
| BP | GO:2000029 | regulation of proanthocyanidin biosynthetic process | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
| BP | GO:2000762 | regulation of phenylpropanoid metabolic process | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT5G61120 |