AT5G61470

Description : C2H2-like zinc finger protein

Gene families : OG_01_0000119 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G61470
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
AT3G10470	No alias	C2H2-type zinc finger family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46080	No alias	C2H2-type zinc finger family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49930	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G04390	No alias	C2H2-type zinc finger family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56200	No alias	C2H2 type zinc finger transcription factor family	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003848	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	IEP	HCCA
MF	GO:0004029	aldehyde dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0004031	aldehyde oxidase activity	IEP	HCCA
MF	GO:0004156	dihydropteroate synthase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004564	beta-fructofuranosidase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0005355	glucose transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009957	epidermal cell fate specification	IEP	HCCA
BP	GO:0009960	endosperm development	IEP	HCCA
BP	GO:0009996	negative regulation of cell fate specification	IEP	HCCA
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	HCCA
BP	GO:0010061	regulation of trichoblast fate specification	IEP	HCCA
BP	GO:0010062	negative regulation of trichoblast fate specification	IEP	HCCA
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	HCCA
BP	GO:0010453	regulation of cell fate commitment	IEP	HCCA
BP	GO:0010454	negative regulation of cell fate commitment	IEP	HCCA
BP	GO:0010466	negative regulation of peptidase activity	IEP	HCCA
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	HCCA
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015149	hexose transmembrane transporter activity	IEP	HCCA
MF	GO:0015152	glucose-6-phosphate transmembrane transporter activity	IEP	HCCA
BP	GO:0015712	hexose phosphate transport	IEP	HCCA
MF	GO:0016623	oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0018479	benzaldehyde dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0018488	aryl-aldehyde oxidase activity	IEP	HCCA
MF	GO:0019115	benzaldehyde dehydrogenase [NAD(P)+] activity	IEP	HCCA
BP	GO:0030162	regulation of proteolysis	IEP	HCCA
BP	GO:0030656	regulation of vitamin metabolic process	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042659	regulation of cell fate specification	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
MF	GO:0045544	gibberellin 20-oxidase activity	IEP	HCCA
BP	GO:0045596	negative regulation of cell differentiation	IEP	HCCA
BP	GO:0045861	negative regulation of proteolysis	IEP	HCCA
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0046137	negative regulation of vitamin metabolic process	IEP	HCCA
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	HCCA
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	HCCA
BP	GO:0046688	response to copper ion	IEP	HCCA
MF	GO:0050362	L-tryptophan:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051346	negative regulation of hydrolase activity	IEP	HCCA
BP	GO:0052547	regulation of peptidase activity	IEP	HCCA
BP	GO:0052548	regulation of endopeptidase activity	IEP	HCCA
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	HCCA
MF	GO:0070529	L-tryptophan aminotransferase activity	IEP	HCCA
MF	GO:0080031	methyl salicylate esterase activity	IEP	HCCA
MF	GO:0080097	L-tryptophan:pyruvate aminotransferase activity	IEP	HCCA
BP	GO:1903888	regulation of plant epidermal cell differentiation	IEP	HCCA
BP	GO:1903889	negative regulation of plant epidermal cell differentiation	IEP	HCCA
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	HCCA
BP	GO:2000067	regulation of root morphogenesis	IEP	HCCA
BP	GO:2000082	regulation of L-ascorbic acid biosynthetic process	IEP	HCCA
BP	GO:2000083	negative regulation of L-ascorbic acid biosynthetic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT5G61470

AT5G61470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation