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Description : Pectin lyase-like superfamily protein
Gene families : OG_01_0005925 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005925_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G61680 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G69940 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G07410 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G07420 | No alias | Pectin lyase-like superfamily protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G07430 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| CC | GO:0009505 | plant-type cell wall | ISS | Interproscan |
| MF | GO:0030599 | pectinesterase activity | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004702 | obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
| MF | GO:0005451 | monovalent cation:proton antiporter activity | IEP | HCCA |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | HCCA |
| BP | GO:0007154 | cell communication | IEP | HCCA |
| BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009806 | lignan metabolic process | IEP | HCCA |
| BP | GO:0009807 | lignan biosynthetic process | IEP | HCCA |
| BP | GO:0009860 | pollen tube growth | IEP | HCCA |
| BP | GO:0009932 | cell tip growth | IEP | HCCA |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | HCCA |
| MF | GO:0015301 | anion:anion antiporter activity | IEP | HCCA |
| MF | GO:0015385 | sodium:proton antiporter activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0023052 | signaling | IEP | HCCA |
| BP | GO:0030029 | actin filament-based process | IEP | HCCA |
| BP | GO:0030048 | actin filament-based movement | IEP | HCCA |
| BP | GO:0035725 | sodium ion transmembrane transport | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0048235 | pollen sperm cell differentiation | IEP | HCCA |
| MF | GO:0051139 | metal ion:proton antiporter activity | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| MF | GO:0140323 | solute:anion antiporter activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000070 | Pectinesterase_cat | 44 | 328 |
| PLAZA 3.0 Dicots | AT5G61680 |