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  5. AT5G62520

AT5G62520


Description : similar to RCD one 5


Gene families : OG_01_0001419 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62520
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
Pp3c16_6270V3.1 No alias WWE protein-protein interaction domain protein family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_14896.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0072593 reactive oxygen species metabolic process IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000026 alpha-1,2-mannosyltransferase activity IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004376 glycolipid mannosyltransferase activity IEP HCCA
MF GO:0004377 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0004644 phosphoribosylglycinamide formyltransferase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0010084 specification of animal organ axis polarity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
MF GO:0080045 quercetin 3'-O-glucosyltransferase activity IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
BP GO:0080186 developmental vegetative growth IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000025 regulation of leaf formation IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 241 304
PLAZA 3.0 Dicots AT5G62520