AT5G62610

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG_01_0000168 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G62610
Cluster	HCCA: Cluster_168

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT4G34530	No alias	cryptochrome-interacting basic-helix-loop-helix 1	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G36540	No alias	BR enhanced expression 2	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004034	aldose 1-epimerase activity	IEP	HCCA
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	HCCA
CC	GO:0005746	mitochondrial respirasome	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
BP	GO:0006012	galactose metabolic process	IEP	HCCA
BP	GO:0006491	N-glycan processing	IEP	HCCA
BP	GO:0006517	protein deglycosylation	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0007021	tubulin complex assembly	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009100	glycoprotein metabolic process	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
MF	GO:0016882	cyclo-ligase activity	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
MF	GO:0030272	5-formyltetrahydrofolate cyclo-ligase activity	IEP	HCCA
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:0070469	respirasome	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	163	210

External Links

PLAZA 3.0 Dicots	AT5G62610

AT5G62610

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation