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Description : RING/U-box superfamily protein
Gene families : OG_01_0006187 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006187_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G63740 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G08730 | No alias | IBR domain-containing protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G63730 | No alias | IBR domain-containing protein | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G63750 | No alias | RING/U-box superfamily protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G63760 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0009008 | DNA-methyltransferase activity | IEP | HCCA |
| BP | GO:0009559 | embryo sac central cell differentiation | IEP | HCCA |
| MF | GO:0009824 | AMP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0015386 | potassium:proton antiporter activity | IEP | HCCA |
| MF | GO:0022821 | potassium ion antiporter activity | IEP | HCCA |
| CC | GO:0043076 | megasporocyte nucleus | IEP | HCCA |
| CC | GO:0043078 | polar nucleus | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0052622 | ATP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0052623 | ADP dimethylallyltransferase activity | IEP | HCCA |
| BP | GO:0060688 | regulation of morphogenesis of a branching structure | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1905428 | regulation of plant organ formation | IEP | HCCA |
| BP | GO:2000032 | regulation of secondary shoot formation | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT5G63740 |