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  5. AT5G63880

AT5G63880


Description : SNF7 family protein


Gene families : OG_01_0003246 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003246_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G63880
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Mp5g18760.1 No alias component VPS20 of ESCRT-III complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0010286 heat acclimation RCA Interproscan
BP GO:0016192 vesicle-mediated transport ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005945 6-phosphofructokinase complex IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006041 glucosamine metabolic process IEP HCCA
BP GO:0006042 glucosamine biosynthetic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007135 meiosis II IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
BP GO:0007568 aging IEP HCCA
CC GO:0008076 voltage-gated potassium channel complex IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010260 animal organ senescence IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010501 RNA secondary structure unwinding IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019779 Atg8 activating enzyme activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated cation channel activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0030173 integral component of Golgi membrane IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031228 intrinsic component of Golgi membrane IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034705 potassium channel complex IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042401 cellular biogenic amine biosynthetic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0046349 amino sugar biosynthetic process IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0061983 meiosis II cell cycle process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070548 L-glutamine aminotransferase activity IEP HCCA
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 193
PLAZA 3.0 Dicots AT5G63880