AT1G27250

Description : Paired amphipathic helix (PAH2) superfamily protein

Gene families : OG_01_0000145 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G27250
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AT1G27220	No alias	paired amphipathic helix repeat-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G27870	No alias	Polynucleotidyl transferase, ribonuclease H-like...	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G77815	No alias	BEST Arabidopsis thaliana protein match is:...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13980	No alias	Polynucleotidyl transferase, ribonuclease H-like...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25270	No alias	Ribonuclease H-like superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
MF	GO:0008146	sulfotransferase activity	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
MF	GO:0015386	potassium:proton antiporter activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0022821	potassium ion antiporter activity	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
MF	GO:1990135	flavonoid sulfotransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003822	PAH	39	82

External Links

PLAZA 3.0 Dicots	AT1G27250

AT1G27250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation