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  5. AT5G65850

AT5G65850


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G65850
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30920 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30925 No alias phospholipase Cs 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30930 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31080 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33020 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46840 No alias F-box family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52495 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53815 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67130 No alias F-box family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02890 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G19630 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23160 No alias F-box family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G31470 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15670 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22791 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44220 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
CC GO:0001673 male germ cell nucleus IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030332 cyclin binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
CC GO:0043073 germ cell nucleus IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 219 343
IPR001810 F-box_dom 35 74
PLAZA 3.0 Dicots AT5G65850