- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Zinc finger C-x8-C-x5-C-x3-H type family protein
Gene families : OG_01_0011720 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G66270 | |
| Cluster | HCCA: Cluster_24 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | ISS | Interproscan |
| CC | GO:0005575 | cellular_component | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | HCCA |
| BP | GO:0000725 | recombinational repair | IEP | HCCA |
| MF | GO:0001872 | (1->3)-beta-D-glucan binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004407 | histone deacetylase activity | IEP | HCCA |
| MF | GO:0004640 | phosphoribosylanthranilate isomerase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| CC | GO:0005834 | heterotrimeric G-protein complex | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006302 | double-strand break repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006323 | DNA packaging | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | HCCA |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | HCCA |
| CC | GO:0008278 | cohesin complex | IEP | HCCA |
| MF | GO:0008469 | histone-arginine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008608 | attachment of spindle microtubules to kinetochore | IEP | HCCA |
| BP | GO:0010032 | meiotic chromosome condensation | IEP | HCCA |
| BP | GO:0010074 | maintenance of meristem identity | IEP | HCCA |
| BP | GO:0010212 | response to ionizing radiation | IEP | HCCA |
| BP | GO:0010332 | response to gamma radiation | IEP | HCCA |
| BP | GO:0010492 | maintenance of shoot apical meristem identity | IEP | HCCA |
| MF | GO:0016273 | arginine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016274 | protein-arginine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016277 | [myelin basic protein]-arginine N-methyltransferase activity | IEP | HCCA |
| CC | GO:0016459 | myosin complex | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| BP | GO:0018195 | peptidyl-arginine modification | IEP | HCCA |
| BP | GO:0018216 | peptidyl-arginine methylation | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019827 | stem cell population maintenance | IEP | HCCA |
| BP | GO:0019919 | peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0030261 | chromosome condensation | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | HCCA |
| BP | GO:0032877 | positive regulation of DNA endoreduplication | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
| MF | GO:0033558 | protein deacetylase activity | IEP | HCCA |
| BP | GO:0034969 | histone arginine methylation | IEP | HCCA |
| BP | GO:0034970 | histone H3-R2 methylation | IEP | HCCA |
| BP | GO:0034971 | histone H3-R17 methylation | IEP | HCCA |
| BP | GO:0034972 | histone H3-R26 methylation | IEP | HCCA |
| MF | GO:0035197 | siRNA binding | IEP | HCCA |
| MF | GO:0035241 | protein-arginine omega-N monomethyltransferase activity | IEP | HCCA |
| MF | GO:0035242 | protein-arginine omega-N asymmetric methyltransferase activity | IEP | HCCA |
| BP | GO:0035246 | peptidyl-arginine N-methylation | IEP | HCCA |
| BP | GO:0035247 | peptidyl-arginine omega-N-methylation | IEP | HCCA |
| BP | GO:0035825 | homologous recombination | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | HCCA |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | HCCA |
| BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | HCCA |
| BP | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | IEP | HCCA |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | HCCA |
| BP | GO:0045596 | negative regulation of cell differentiation | IEP | HCCA |
| BP | GO:0045740 | positive regulation of DNA replication | IEP | HCCA |
| BP | GO:0048497 | maintenance of floral organ identity | IEP | HCCA |
| BP | GO:0051026 | chiasma assembly | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051177 | meiotic sister chromatid cohesion | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051316 | attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation | IEP | HCCA |
| BP | GO:0051455 | monopolar spindle attachment to meiosis I kinetochore | IEP | HCCA |
| BP | GO:0051754 | meiotic sister chromatid cohesion, centromeric | IEP | HCCA |
| MF | GO:0061980 | regulatory RNA binding | IEP | HCCA |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | HCCA |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | HCCA |
| BP | GO:0070601 | centromeric sister chromatid cohesion | IEP | HCCA |
| BP | GO:0090068 | positive regulation of cell cycle process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090700 | maintenance of plant organ identity | IEP | HCCA |
| BP | GO:0098727 | maintenance of cell number | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | HCCA |
| BP | GO:0140527 | reciprocal homologous recombination | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1903046 | meiotic cell cycle process | IEP | HCCA |
| CC | GO:1905360 | GTPase complex | IEP | HCCA |
| BP | GO:2000105 | positive regulation of DNA-dependent DNA replication | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT5G66270 |