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  5. AT5G66830

AT5G66830


Description : F-box family protein with a domain of unknown function (DUF295)


Gene families : OG_01_0000101 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G66830
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G27580 No alias Protein of unknown function (DUF295) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G03560 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04810 No alias Protein of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04830 No alias Protein of unknown function (DUF295) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04840 No alias Protein of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G33200 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03730 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22345 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10820 No alias F-box family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12810 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12820 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22060 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22170 No alias F-box family protein with a domain of unknown function (DUF295) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22660 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38270 No alias F-box family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004396 hexokinase activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0004448 isocitrate dehydrogenase activity IEP HCCA
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0004845 uracil phosphoribosyltransferase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006102 isocitrate metabolic process IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005174 DUF295 305 358
IPR001810 F-box_dom 19 59
PLAZA 3.0 Dicots AT5G66830